Transcriptome Survey of a Marine Food Fish: Asian Seabass (Lates calcarifer)
نویسندگان
چکیده
منابع مشابه
Morpho-histological characterisation of the alimentary canal of an important food fish, Asian seabass (Lates calcarifer)
Asian seabass (Lates calcarifer) is a food fish of increasing aquaculture importance. In order to improve our understanding on the digestive system and feeding of this species, morphological and histological features of the gut were studied. Morphologically, the Asian seabass gut is defined by a short and muscular esophagus, well-developed stomach and comparatively short intestine. Mucous secre...
متن کاملAnalysis of Stress-Responsive Transcriptome in the Intestine of Asian Seabass (Lates calcarifer) using RNA-Seq
Identification of differentially expressed genes (DEGs) and regulated pathways in response to stressors using a whole-genome approach is critical to understanding the mechanisms underlying stress responses. We challenged Asian seabass with lipopolysaccharide (LPS), Vibrio harveyi, high salinity and fasting, and sequenced six cDNA libraries of intestine samples using Roche 454 RNA-seq. Over 1 mi...
متن کاملPrimary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome
As part of our Asian seabass genome project, we are generating an inventory of repeat elements in the genome and transcriptome. The karyotype showed a diploid number of 2n = 24 chromosomes with a variable number of B-chromosomes. The transcriptome and genome of Asian seabass were searched for repetitive elements with experimental and bioinformatics tools. Six different types of repeats constitu...
متن کاملAsian sea bass, Lates calcarifer
Lates calcarifer, commonly known as the Asian sea bass or barramundi, is an 16 interesting species that has great aquaculture potential in Asia including Malaysia and also 17 Australia. We have investigated essential fatty acid metabolism in this species, focusing on 18 the endogenous highly unsaturated fatty acid (HUFA) synthesis pathway using both 19 biochemical and molecular biological appro...
متن کاملA First Generation BAC-Based Physical Map of the Asian Seabass (Lates calcarifer)
BACKGROUND The Asian seabass (Lates calcarifer) is an important marine foodfish species in Southeast Asia and Australia. Genetic improvement of this species has been achieved to some extent through selective breeding programs since 1990s. Several genomic tools such as DNA markers, a linkage map, cDNA and BAC libraries have been developed to assist selective breeding. A physical map is still lac...
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ژورنال
عنوان ژورنال: Journal of Marine Science and Engineering
سال: 2015
ISSN: 2077-1312
DOI: 10.3390/jmse3020382